../../tmp/servers/virsirnadb/1085145649
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2030 | 1 | tccatgtgcactgccttgg | 19 | |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 1678 | ................... | 1696 | 100 |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 486 | ____.........g..___ | 475 | 57 |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 4744 | ________.........._ | 4735 | 52 |
| DQ473496.1 | Human rhinovirus 49, complete genome | 1666 | _...........c...... | 1683 | 89 |
| FJ445134.1 | Human rhinovirus 49 isolate F04, complete genome | 1669 | _...........c...... | 1686 | 89 |
| DQ473497.1 | Human rhinovirus 23, complete genome | 1587 | ............t..a... | 1605 | 89 |
| X02316.1 | Human rhinovirus 2, complete sequence | 1664 | _...........t..c... | 1681 | 84 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 1154 | ..........a...aa.._ | 1171 | 78 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 1568 | _.t..........aa..__ | 1583 | 68 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 2575 | _..........________ | 2566 | 52 |
| FJ445155.1 | Human rhinovirus 79 strain ATCC VR-1189, complete genome | 3344 | _..........________ | 3335 | 52 |
| FJ445140.1 | Human rhinovirus 56 strain ATCC VR-1166, complete genome | 1679 | _..c.c.........a... | 1696 | 78 |
| FJ445147.1 | Human rhinovirus 65 strain ATCC VR-1175, complete genome | 1153 | ..........a...aa.._ | 1170 | 78 |
| FJ445160.1 | Human rhinovirus 82 strain ATCC VR-1192, complete genome | 1144 | ..........a...aa.._ | 1161 | 78 |
| DQ473495.1 | Human rhinovirus 38, complete genome | 1140 | ..........g..._____ | 1153 | 68 |
| FJ445177.1 | Human rhinovirus 9 strain ATCC VR-489, complete genome | 1141 | ..........a..._____ | 1154 | 68 |
| FJ445180.1 | Human rhinovirus 38 strain ATCC VR-1148, complete genome | 1140 | ..........g..._____ | 1153 | 68 |
| FJ445163.1 | Human rhinovirus 85 strain ATCC VR-1195, complete genome | 1682 | .........ct.a..c... | 1700 | 78 |
| FJ445173.1 | Human rhinovirus 98 strain ATCC VR-1298, complete genome | 1675 | .........tt.a..a... | 1693 | 78 |
| DQ473489.1 | Human rhinovirus 70, complete genome | 1152 | ..........a..______ | 1164 | 63 |
| EF173420.1 | Human rhinovirus 17, complete genome | 1148 | ..........g..______ | 1160 | 63 |
| DQ473500.1 | Human rhinovirus 59, complete genome | 484 | ___..........g..___ | 472 | 63 |
| FJ445146.1 | Human rhinovirus 63 strain ATCC VR-1173, complete genome | 488 | ___..........g..___ | 476 | 63 |
| EF173415.1 | Human rhinovirus 12, complete genome | 5907 | ...........________ | 5897 | 57 |
| L05355.1 | HRV14POL Human rhinovirus type 14 polyprotein gene | 1572 | _.t..........ag..__ | 1587 | 68 |
| L05355.1 | HRV14POL Human rhinovirus type 14 polyprotein gene | 1685 | _..ca..........____ | 1698 | 63 |
| NC_001490.1 | Human rhinovirus 14, complete genome | 1572 | _.t..........ag..__ | 1587 | 68 |
| NC_001490.1 | Human rhinovirus 14, complete genome | 1685 | _..ca..........____ | 1698 | 63 |
| FJ445171.1 | Human rhinovirus 96 strain ATCC VR-1296, complete genome | 2864 | ___..t.t.........__ | 2877 | 63 |
| FJ445113.1 | Human rhinovirus 8 strain ATCC VR-1118, complete genome | 482 | ____.........g..___ | 471 | 57 |
| FJ445132.1 | Human rhinovirus 45 strain ATCC VR-1155, complete genome | 1597 | __..c........._____ | 1586 | 57 |
| FJ445157.1 | Human rhinovirus 81 strain ATCC VR-1191, complete genome | 487 | ____.........g..___ | 476 | 57 |
| FJ445158.1 | Human rhinovirus 81 isolate F06, complete genome | 487 | ____.........g..___ | 476 | 57 |
| FJ445159.1 | Human rhinovirus 81 isolate F07, complete genome | 487 | ____.........g..___ | 476 | 57 |
| FJ445170.1 | Human rhinovirus 95 strain ATCC VR-1301, complete genome | 1970 | ___..t.........____ | 1959 | 57 |
| EU840952.2 | Human rhinovirus C strain CL-170085, complete genome | 4728 | ________.........._ | 4719 | 52 |
| EF173423.1 | Human rhinovirus 37, complete genome | 3338 | _..........________ | 3329 | 52 |